STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420325_02425Unannotated protein. (319 aa)    
Predicted Functional Partners:
GCA_000420325_03553
Unannotated protein.
 
 
 
 0.958
GCA_000420325_01839
Unannotated protein.
 
 
 
 0.916
GCA_000420325_02549
Unannotated protein.
    
 
 0.915
GCA_000420325_03551
Unannotated protein.
 
 
   0.888
GCA_000420325_03512
Unannotated protein.
 
 
 
 0.887
GCA_000420325_03707
Unannotated protein.
  
 
 0.877
GCA_000420325_03538
Unannotated protein.
   
   0.872
GCA_000420325_03724
Unannotated protein.
   
 
 0.869
GCA_000420325_02526
Unannotated protein.
   
   0.867
GCA_000420325_03531
Unannotated protein.
   
   0.867
Your Current Organism:
Spongiibacter tropicus
NCBI taxonomy Id: 1123279
Other names: S. tropicus DSM 19543, Spongiibacter tropicus DSM 19543
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.