STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420325_02894Unannotated protein. (291 aa)    
Predicted Functional Partners:
GCA_000420325_02893
Unannotated protein.
 
 0.999
GCA_000420325_02890
Unannotated protein.
 
 
 0.904
GCA_000420325_02891
Unannotated protein.
 
 
 0.864
GCA_000420325_02883
Unannotated protein.
 
  
 0.862
GCA_000420325_02884
Unannotated protein.
 
 
 0.857
GCA_000420325_02887
Unannotated protein.
 
  
 0.851
GCA_000420325_02888
Unannotated protein.
 
 
 0.844
GCA_000420325_02889
Unannotated protein.
 
 
 0.842
GCA_000420325_00596
Unannotated protein.
 
 
 0.833
GCA_000420325_02892
Unannotated protein.
 
  
 0.833
Your Current Organism:
Spongiibacter tropicus
NCBI taxonomy Id: 1123279
Other names: S. tropicus DSM 19543, Spongiibacter tropicus DSM 19543
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.