STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420325_03005Unannotated protein. (683 aa)    
Predicted Functional Partners:
GCA_000420325_01900
Unannotated protein.
   
 0.981
GCA_000420325_01355
Unannotated protein.
  
 
 0.944
GCA_000420325_00124
Unannotated protein.
  
 0.933
GCA_000420325_00102
Unannotated protein.
   
 
 0.819
GCA_000420325_03429
Unannotated protein.
   
 
 0.806
GCA_000420325_00043
Unannotated protein.
    
 0.801
GCA_000420325_02132
Unannotated protein.
    
 0.801
GCA_000420325_00277
Unannotated protein.
     
 0.798
GCA_000420325_02687
Unannotated protein.
  
 
 0.797
GCA_000420325_00993
Unannotated protein.
    
 0.781
Your Current Organism:
Spongiibacter tropicus
NCBI taxonomy Id: 1123279
Other names: S. tropicus DSM 19543, Spongiibacter tropicus DSM 19543
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.