STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH43651.1Chromate transporter. (173 aa)    
Predicted Functional Partners:
SHH43699.1
Chromate transporter.
 
   
0.911
prmC
Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
       0.799
SHH43778.1
Uncharacterized conserved protein YqhQ.
       0.798
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
       0.713
rpmE
LSU ribosomal protein L31P; Binds the 23S rRNA.
       0.508
Your Current Organism:
Sporanaerobacter acetigenes
NCBI taxonomy Id: 1123281
Other names: S. acetigenes DSM 13106, Sporanaerobacter acetigenes DSM 13106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.