STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH90142.1Protein of unknown function. (161 aa)    
Predicted Functional Partners:
SHH90116.1
Lysophospholipase L1.
     0.956
SHH90187.1
DHHW protein.
 
     0.912
SHH90164.1
Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family.
 
     0.854
SHH37573.1
SGNH hydrolase-like domain-containing protein, acetyltransferase AlgX.
 
     0.762
SHH37605.1
Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family.
 
     0.487
SHH86306.1
Protein of unknown function.
  
     0.475
SHH90090.1
D-alanine-D-alanine ligase.
       0.407
Your Current Organism:
Sporanaerobacter acetigenes
NCBI taxonomy Id: 1123281
Other names: S. acetigenes DSM 13106, Sporanaerobacter acetigenes DSM 13106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.