Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHH62261.1 | SHH63733.1 | SAMN02745823_00519 | SAMN02745823_00573 | Single-strand binding protein. | DNA processing protein. | 0.545 |
| SHH62261.1 | SHH64766.1 | SAMN02745823_00519 | SAMN02745823_00612 | Single-strand binding protein. | Single-strand binding protein family protein. | 0.784 |
| SHH62261.1 | SHI19911.1 | SAMN02745823_00519 | SAMN02745823_03300 | Single-strand binding protein. | Glutamate synthase (ferredoxin). | 0.513 |
| SHH62261.1 | SHI22261.1 | SAMN02745823_00519 | SAMN02745823_03575 | Single-strand binding protein. | ATP-dependent DNA helicase RecQ. | 0.428 |
| SHH62261.1 | polA | SAMN02745823_00519 | SAMN02745823_02108 | Single-strand binding protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.678 |
| SHH62261.1 | topA | SAMN02745823_00519 | SAMN02745823_00572 | Single-strand binding protein. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.925 |
| SHH63733.1 | SHH62261.1 | SAMN02745823_00573 | SAMN02745823_00519 | DNA processing protein. | Single-strand binding protein. | 0.545 |
| SHH63733.1 | SHH64766.1 | SAMN02745823_00573 | SAMN02745823_00612 | DNA processing protein. | Single-strand binding protein family protein. | 0.438 |
| SHH63733.1 | SHH76442.1 | SAMN02745823_00573 | SAMN02745823_00909 | DNA processing protein. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.409 |
| SHH63733.1 | topA | SAMN02745823_00573 | SAMN02745823_00572 | DNA processing protein. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.914 |
| SHH63733.1 | trmFO | SAMN02745823_00573 | SAMN02745823_00571 | DNA processing protein. | methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily. | 0.682 |
| SHH64766.1 | SHH62261.1 | SAMN02745823_00612 | SAMN02745823_00519 | Single-strand binding protein family protein. | Single-strand binding protein. | 0.784 |
| SHH64766.1 | SHH63733.1 | SAMN02745823_00612 | SAMN02745823_00573 | Single-strand binding protein family protein. | DNA processing protein. | 0.438 |
| SHH64766.1 | SHI19911.1 | SAMN02745823_00612 | SAMN02745823_03300 | Single-strand binding protein family protein. | Glutamate synthase (ferredoxin). | 0.513 |
| SHH64766.1 | SHI22261.1 | SAMN02745823_00612 | SAMN02745823_03575 | Single-strand binding protein family protein. | ATP-dependent DNA helicase RecQ. | 0.428 |
| SHH64766.1 | polA | SAMN02745823_00612 | SAMN02745823_02108 | Single-strand binding protein family protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.525 |
| SHH64766.1 | topA | SAMN02745823_00612 | SAMN02745823_00572 | Single-strand binding protein family protein. | DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.925 |
| SHH76442.1 | SHH63733.1 | SAMN02745823_00909 | SAMN02745823_00573 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | DNA processing protein. | 0.409 |
| SHH76442.1 | SHI19911.1 | SAMN02745823_00909 | SAMN02745823_03300 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | Glutamate synthase (ferredoxin). | 0.938 |
| SHH76442.1 | leuS | SAMN02745823_00909 | SAMN02745823_00559 | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.855 |
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