STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH73447.1trimethylamine-N-oxide reductase (cytochrome c); Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (905 aa)    
Predicted Functional Partners:
SHH73472.1
Fe-S-cluster-containing dehydrogenase component.
 0.987
SHH73334.1
Fe-S-cluster-containing dehydrogenase component.
 
 0.965
SHI03848.1
Fe-S-cluster-containing dehydrogenase component.
 
 0.942
SHH76442.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.900
SHH58679.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.
    
 0.897
SHH98670.1
Carbon-monoxide dehydrogenase iron sulfur subunit.
 
 0.879
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.857
SHH77793.1
Formate dehydrogenase major subunit.
    
 0.841
SHH95126.1
Glycine/D-amino acid oxidase.
   
 
 0.819
SHI19911.1
Glutamate synthase (ferredoxin).
  
 0.782
Your Current Organism:
Sporobacter termitidis
NCBI taxonomy Id: 1123282
Other names: S. termitidis DSM 10068, Sporobacter termitidis DSM 10068
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