Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHH75419.1 | SHH75466.1 | SAMN02745823_00865 | SAMN02745823_00867 | RNA polymerase sporulation-specific sigma factor; Belongs to the sigma-70 factor family. | Stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family. | 0.951 |
| SHH75419.1 | SHH75491.1 | SAMN02745823_00865 | SAMN02745823_00868 | RNA polymerase sporulation-specific sigma factor; Belongs to the sigma-70 factor family. | Hypothetical protein. | 0.551 |
| SHH75419.1 | spoIIAB | SAMN02745823_00865 | SAMN02745823_00866 | RNA polymerase sporulation-specific sigma factor; Belongs to the sigma-70 factor family. | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.988 |
| SHH75466.1 | SHH75419.1 | SAMN02745823_00867 | SAMN02745823_00865 | Stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family. | RNA polymerase sporulation-specific sigma factor; Belongs to the sigma-70 factor family. | 0.951 |
| SHH75466.1 | SHH75491.1 | SAMN02745823_00867 | SAMN02745823_00868 | Stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family. | Hypothetical protein. | 0.438 |
| SHH75466.1 | spoIIAB | SAMN02745823_00867 | SAMN02745823_00866 | Stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family. | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.999 |
| SHH75491.1 | SHH75419.1 | SAMN02745823_00868 | SAMN02745823_00865 | Hypothetical protein. | RNA polymerase sporulation-specific sigma factor; Belongs to the sigma-70 factor family. | 0.551 |
| SHH75491.1 | SHH75466.1 | SAMN02745823_00868 | SAMN02745823_00867 | Hypothetical protein. | Stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family. | 0.438 |
| SHH75491.1 | SHH77195.1 | SAMN02745823_00868 | SAMN02745823_00949 | Hypothetical protein. | Protein of unknown function. | 0.479 |
| SHH75491.1 | spoIIAB | SAMN02745823_00868 | SAMN02745823_00866 | Hypothetical protein. | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | 0.438 |
| SHH77195.1 | SHH75491.1 | SAMN02745823_00949 | SAMN02745823_00868 | Protein of unknown function. | Hypothetical protein. | 0.479 |
| spoIIAB | SHH75419.1 | SAMN02745823_00866 | SAMN02745823_00865 | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | RNA polymerase sporulation-specific sigma factor; Belongs to the sigma-70 factor family. | 0.988 |
| spoIIAB | SHH75466.1 | SAMN02745823_00866 | SAMN02745823_00867 | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | Stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family. | 0.999 |
| spoIIAB | SHH75491.1 | SAMN02745823_00866 | SAMN02745823_00868 | Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition. | Hypothetical protein. | 0.438 |