STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH77128.1ABC-2 type transport system ATP-binding protein. (337 aa)    
Predicted Functional Partners:
SHH77154.1
ABC-2 type transport system permease protein.
 
 0.987
SHH77175.1
ABC-2 type transport system permease protein.
 
   
 0.941
SHH77195.1
Protein of unknown function.
 
     0.923
SHH98424.1
NitT/TauT family transport system ATP-binding protein.
 
   
 
0.783
SHH91846.1
ABC-2 type transport system permease protein.
  
 0.679
SHI22694.1
ABC-2 type transport system permease protein.
  
 0.567
SHH86537.1
Hypothetical protein.
   
 0.553
SHI19743.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.
 
   
  0.542
atpD
ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
    
 
 0.518
SHI00168.1
CAAX protease self-immunity.
  
 
 0.517
Your Current Organism:
Sporobacter termitidis
NCBI taxonomy Id: 1123282
Other names: S. termitidis DSM 10068, Sporobacter termitidis DSM 10068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.