STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH86162.1Transcriptional regulator, TetR family. (187 aa)    
Predicted Functional Partners:
SHH86140.1
Putative ABC transport system permease protein.
 
     0.560
SHH87969.1
Energy-coupling factor transport system substrate-specific component.
  
     0.548
SHH86116.1
Putative ABC transport system ATP-binding protein.
   
   0.524
SHI23077.1
Energy-coupling factor transport system substrate-specific component.
  
     0.509
SHH87987.1
Energy-coupling factor transport system permease protein.
  
     0.500
SHH88034.1
ATP-binding cassette, subfamily B.
  
     0.489
SHI14813.1
ATP-binding cassette, subfamily B.
  
     0.485
SHH88009.1
Energy-coupling factor transport system ATP-binding protein.
  
     0.484
SHI23096.1
ATP-binding cassette, subfamily B.
  
     0.480
SHI23088.1
Energy-coupling factor transport system ATP-binding protein.
  
     0.479
Your Current Organism:
Sporobacter termitidis
NCBI taxonomy Id: 1123282
Other names: S. termitidis DSM 10068, Sporobacter termitidis DSM 10068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.