STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHH87694.1DNA-binding transcriptional regulator, GntR family. (222 aa)    
Predicted Functional Partners:
SHI02983.1
DNA-binding transcriptional regulator, FadR family.
 
  
 0.709
SHI14626.1
FCD domain-containing protein.
  
     0.659
SHI17537.1
Transcriptional regulator, IclR family.
  
  
 0.565
ispE
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.
    
 0.514
SHH87711.1
Hypothetical protein.
 
     0.486
SHH60994.1
GntR family transcriptional regulator.
  
   
 0.485
SHH67077.1
Acetolactate synthase, small subunit.
  
    0.472
SHH87654.1
Oxaloacetate decarboxylase, alpha subunit.
 
     0.469
SHH87674.1
Ureidoacrylate peracid hydrolase.
       0.469
SHI16251.1
Release factor glutamine methyltransferase.
    
   0.463
Your Current Organism:
Sporobacter termitidis
NCBI taxonomy Id: 1123282
Other names: S. termitidis DSM 10068, Sporobacter termitidis DSM 10068
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.