STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI14618.1D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (329 aa)    
Predicted Functional Partners:
SHH76442.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.850
SHI14602.1
Sugar phosphate isomerase/epimerase.
  
 
  0.840
SHI14562.1
6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.
  
 
 0.829
SHI14590.1
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
  
 
 0.821
SHI14609.1
Gluconate 5-dehydrogenase.
 
 
 0.815
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
    0.798
SHI14570.1
2-dehydro-3-deoxygluconokinase.
  
 
 0.797
SHI10008.1
Thioredoxin-like [2Fe-2S] ferredoxin.
     
 0.794
SHI14543.1
Phosphoenolpyruvate phosphomutase.
  
 0.789
SHI14552.1
Protein of unknown function.
    
 0.788
Your Current Organism:
Sporobacter termitidis
NCBI taxonomy Id: 1123282
Other names: S. termitidis DSM 10068, Sporobacter termitidis DSM 10068
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