STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI15041.1Repeat domain (List_Bact_rpt). (3160 aa)    
Predicted Functional Partners:
SHH87199.1
Biotin synthase.
  
     0.722
SHI13474.1
4-alpha-glucanotransferase.
    
 0.677
SHH97555.1
Nitrogenase component 1 type Oxidoreductase.
  
     0.637
SHI14224.1
Nitrogenase molybdenum-iron protein, alpha and beta chains.
  
     0.622
SHI07539.1
Mannose-1-phosphate guanylyltransferase / phosphomannomutase.
     
 0.607
SHI19244.1
Nucleoside-triphosphatase.
  
  
  0.584
SHI14971.1
Energy-coupling factor transport system ATP-binding protein.
 
     0.571
SHI14980.1
Energy-coupling factor transport system permease protein.
 
     0.534
SHI15020.1
Uncharacterized conserved protein, DUF58 family, contains vWF domain.
       0.532
SHI15031.1
MoxR-like ATPase.
       0.532
Your Current Organism:
Sporobacter termitidis
NCBI taxonomy Id: 1123282
Other names: S. termitidis DSM 10068, Sporobacter termitidis DSM 10068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.