STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHI19035.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (311 aa)    
Predicted Functional Partners:
SHI19028.1
Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains.
 
  
  0.965
SHI20049.1
Two component transcriptional regulator, LytTR family.
 
 0.943
SHH82411.1
Two component transcriptional regulator, LytTR family.
 
 0.922
SHI11267.1
Signal transduction histidine kinase.
    
 0.902
SHH65413.1
Hypothetical protein.
 
      0.900
SHI22220.1
Two component transcriptional regulator, LytTR family.
 
 0.889
SHH65370.1
Two-component response regulator, SAPR family, consists of REC, wHTH and BTAD domains.
  
  0.855
SHI13591.1
Signal transduction histidine kinase.
 
      0.843
SHI16266.1
Signal transduction histidine kinase.
 
      0.831
SHH48585.1
PocR sensory domain-containing protein.
  
  
  0.721
Your Current Organism:
Sporobacter termitidis
NCBI taxonomy Id: 1123282
Other names: S. termitidis DSM 10068, Sporobacter termitidis DSM 10068
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.