STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377985_00053Unannotated protein. (294 aa)    
Predicted Functional Partners:
GCA_000377985_02105
Unannotated protein.
   
 0.997
GCA_000377985_00051
Unannotated protein.
 
 
 0.987
GCA_000377985_00054
Unannotated protein.
  
 0.979
GCA_000377985_00052
Unannotated protein.
  
  
 0.972
GCA_000377985_02104
Unannotated protein.
  
 
 0.968
GCA_000377985_00569
Unannotated protein.
  
 
 0.960
GCA_000377985_00098
Unannotated protein.
 
 0.959
GCA_000377985_00622
Unannotated protein.
  
 
 0.959
GCA_000377985_02108
Unannotated protein.
  
 
 0.955
GCA_000377985_02107
Unannotated protein.
  
 
 0.954
Your Current Organism:
Sporolactobacillus vineae
NCBI taxonomy Id: 1123284
Other names: S. vineae DSM 21990 = SL153, Sporolactobacillus sp. SL153, Sporolactobacillus vineae DSM 21990, Sporolactobacillus vineae DSM 21990 = SL153, Sporolactobacillus vineae SL153, Sporolactobacillus vineae SL153 = DSM 21990
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.