STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377985_00710Unannotated protein. (477 aa)    
Predicted Functional Partners:
GCA_000377985_00709
Unannotated protein.
 
 0.994
GCA_000377985_01558
Unannotated protein.
 
 0.978
GCA_000377985_01006
Unannotated protein.
 
 0.928
GCA_000377985_00341
Unannotated protein.
    
 0.868
GCA_000377985_00647
Unannotated protein.
    
 0.861
GCA_000377985_00383
Unannotated protein.
    
 0.787
GCA_000377985_01881
Unannotated protein.
 
 
 0.764
GCA_000377985_01882
Unannotated protein.
  
 
 0.733
GCA_000377985_01970
Unannotated protein.
     
 0.593
GCA_000377985_00791
Unannotated protein.
   
 0.509
Your Current Organism:
Sporolactobacillus vineae
NCBI taxonomy Id: 1123284
Other names: S. vineae DSM 21990 = SL153, Sporolactobacillus sp. SL153, Sporolactobacillus vineae DSM 21990, Sporolactobacillus vineae DSM 21990 = SL153, Sporolactobacillus vineae SL153, Sporolactobacillus vineae SL153 = DSM 21990
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.