STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377985_02140Unannotated protein. (246 aa)    
Predicted Functional Partners:
GCA_000377985_02135
Unannotated protein.
  
  
 0.917
GCA_000377985_00445
Unannotated protein.
   
  0.910
GCA_000377985_02136
Unannotated protein.
  
  
 0.903
GCA_000377985_02137
Unannotated protein.
  
  
 0.891
GCA_000377985_02138
Unannotated protein.
  
  
 0.887
GCA_000377985_02139
Unannotated protein.
  
  
 0.872
GCA_000377985_02116
Unannotated protein.
  
 0.808
GCA_000377985_00107
Unannotated protein.
  
 
   0.801
GCA_000377985_00161
Unannotated protein.
   
 
 0.798
GCA_000377985_00790
Unannotated protein.
   
 
 0.781
Your Current Organism:
Sporolactobacillus vineae
NCBI taxonomy Id: 1123284
Other names: S. vineae DSM 21990 = SL153, Sporolactobacillus sp. SL153, Sporolactobacillus vineae DSM 21990, Sporolactobacillus vineae DSM 21990 = SL153, Sporolactobacillus vineae SL153, Sporolactobacillus vineae SL153 = DSM 21990
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.