STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000377985_02631Unannotated protein. (286 aa)    
Predicted Functional Partners:
GCA_000377985_00745
Unannotated protein.
  
 0.993
GCA_000377985_01523
Unannotated protein.
  
 0.993
GCA_000377985_02334
Unannotated protein.
  
 0.993
GCA_000377985_00796
Unannotated protein.
    
 0.904
GCA_000377985_00813
Unannotated protein.
    
 0.904
GCA_000377985_01567
Unannotated protein.
    
 0.904
GCA_000377985_02633
Unannotated protein.
  
 
 0.879
GCA_000377985_01303
Unannotated protein.
 
 
 0.847
GCA_000377985_01276
Unannotated protein.
    
 0.836
GCA_000377985_00303
Unannotated protein.
    
 0.773
Your Current Organism:
Sporolactobacillus vineae
NCBI taxonomy Id: 1123284
Other names: S. vineae DSM 21990 = SL153, Sporolactobacillus sp. SL153, Sporolactobacillus vineae DSM 21990, Sporolactobacillus vineae DSM 21990 = SL153, Sporolactobacillus vineae SL153, Sporolactobacillus vineae SL153 = DSM 21990
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.