STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDF70114.1N-acetylmuramoyl-L-alanine amidase. (383 aa)    
Predicted Functional Partners:
SDF70088.1
Sporulation and spore germination.
    
  0.849
SDF33082.1
NlpC/P60 family protein.
  
 
 0.756
SDF76859.1
Putative peptidoglycan binding domain-containing protein.
  
 
 0.756
SDF09557.1
Cell wall-associated hydrolase, NlpC family.
  
 
 0.748
SDE99961.1
Putative peptidoglycan binding domain-containing protein.
    
 0.734
SDF00963.1
Putative peptidoglycan binding domain-containing protein.
    
 0.734
SDF84600.1
Putative peptidoglycan binding domain-containing protein.
    
 0.734
SDF37279.1
N-acetylmuramoyl-L-alanine amidase.
 
 
 
0.720
SDF51302.1
N-acetylmuramoyl-L-alanine amidase.
  
  
 
0.677
SDF22027.1
N-acetylmuramoyl-L-alanine amidase.
   
 
 0.584
Your Current Organism:
Sporolituus thermophilus
NCBI taxonomy Id: 1123285
Other names: S. thermophilus DSM 23256, Sporolituus thermophilus DSM 23256, Veillonellaceae bacterium AeG
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