STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ftsYSignal recognition particle receptor FtsY. (305 aa)    
Predicted Functional Partners:
ffh
Signal recognition particle protein.
 
0.989
secY
Protein translocase subunit SecY.
   
 0.965
secG
Protein translocase, SecG subunit.
   
 0.952
secE
Preprotein translocase SecE subunit.
    
 0.947
rplS
50S ribosomal protein L19.
 
 
 
 0.914
rplW
50S ribosomal protein L23.
   
 
 0.911
rplO
50S ribosomal protein L15.
  
 
 0.910
rplE
50S ribosomal protein L5.
  
 
 
 0.909
rplC
50S ribosomal protein L3.
   
 
 0.908
rplR
50S ribosomal protein L18.
   
 
 0.906
Your Current Organism:
Sporomusa ovata
NCBI taxonomy Id: 1123288
Other names: S. ovata DSM 2662, Sporomusa ovata DSM 2662
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.