STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
livM2High-affinity branched-chain amino acid ABC transporter system permease protein LivM. (322 aa)    
Predicted Functional Partners:
livH2
High-affinity branched-chain amino acid transport system permease protein LivH.
 
0.999
livF2
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
  
  0.991
livG2
High-affinity branched-chain amino acid transport ATP-binding protein LivG.
  
 0.989
livF1
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
 0.988
livF3
High-affinity branched-chain amino acid transport ATP-binding protein LivF.
 
 0.987
livG1
High-affinity branched-chain amino acid transport ATP-binding protein LivG.
 
 0.985
livG3
High-affinity branched-chain amino acid transport ATP-binding protein LivG.
 
 0.982
livH1
High-affinity branched-chain amino acid ABC transporter system permease protein LivH.
 
0.974
livK2
Branched-chain amino binding protein precursor.
 
 
 0.966
urtB
Urea ABC transporter, permease protein UrtB.
 
 0.965
Your Current Organism:
Sporomusa ovata
NCBI taxonomy Id: 1123288
Other names: S. ovata DSM 2662, Sporomusa ovata DSM 2662
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