STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL62371.1SpoIVB peptidase S55. (601 aa)    
Predicted Functional Partners:
SFL62169.1
Beta-barrel assembly machine subunit BamA.
 
  
 0.905
SFL62105.1
Periplasmic chaperone for outer membrane proteins Skp.
 
  
 0.903
SFL62140.1
Periplasmic chaperone for outer membrane proteins Skp.
 
  
 0.903
SFL33086.1
Outer membrane protein.
 
  
 0.893
SFL70528.1
Outer membrane protein.
 
  
 0.893
SFM00712.1
Periplasmic chaperone for outer membrane proteins Skp.
 
  
 0.893
SFM36483.1
Periplasmic chaperone for outer membrane proteins Skp.
 
  
 0.893
SFM00918.1
Outer membrane protein.
 
  
 0.891
SFL36010.1
Beta-barrel assembly machine subunit BamA.
 
  
 0.885
lpxA
acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
 
 0.870
Your Current Organism:
Pelosinus propionicus
NCBI taxonomy Id: 1123291
Other names: P. propionicus DSM 13327, Pelosinus propionicus ATCC BAA-626, Pelosinus propionicus DSM 13327, Pelosinus propionicus TmPN3, Sporotalea propionica DSM 13327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.