STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM18122.1Sporulation protein YqfC/sporulation protein YabP,TIGR02892. (93 aa)    
Predicted Functional Partners:
SFM18153.1
Spore cortex biosynthesis protein YabQ.
 
  
 0.935
SFL81376.1
Stage III sporulation protein AC.
  
  
 0.848
SFL32380.1
Similar to stage IV sporulation protein.
 
   
 0.834
SFL87688.1
Sporulation integral membrane protein YlbJ.
 
   
 0.802
SFL73325.1
Stage II sporulation protein R.
  
  
 0.799
SFL81401.1
Stage III sporulation protein AA.
  
  
 0.796
SFL32084.1
Spore protease.
  
   
 0.789
SFL62502.1
Putative DeoR family transcriptional regulator, stage III sporulation protein D.
  
   
 0.786
SFL32094.1
Stage II sporulation protein P.
  
   
 0.785
SFL88924.1
Transcriptional regulator, AbrB family.
 
     0.785
Your Current Organism:
Pelosinus propionicus
NCBI taxonomy Id: 1123291
Other names: P. propionicus DSM 13327, Pelosinus propionicus ATCC BAA-626, Pelosinus propionicus DSM 13327, Pelosinus propionicus TmPN3, Sporotalea propionica DSM 13327
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.