STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000423705_00253Unannotated protein. (406 aa)    
Predicted Functional Partners:
GCA_000423705_00254
Unannotated protein.
 
   
 0.815
GCA_000423705_00597
Unannotated protein.
  
 0.783
GCA_000423705_02413
Unannotated protein.
   
 
 0.765
GCA_000423705_01259
Unannotated protein.
 
 
  0.737
GCA_000423705_02128
Unannotated protein.
  
 0.735
GCA_000423705_03591
Unannotated protein.
 
    0.731
GCA_000423705_02155
Unannotated protein.
    
 0.705
GCA_000423705_01705
Unannotated protein.
     
 0.688
GCA_000423705_00550
Unannotated protein.
   
  0.682
GCA_000423705_00845
Unannotated protein.
   
  0.682
Your Current Organism:
Stappia stellulata
NCBI taxonomy Id: 1123294
Other names: S. stellulata DSM 5886, Stappia stellulata DSM 5886
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.