Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_01200 | DXC78_01220 | GCA_000420345_00160 | GCA_000420345_00164 | Unannotated protein. | Unannotated protein; Belongs to the FPP/GGPP synthase family. | 0.776 |
DXC78_01200 | DXC78_01230 | GCA_000420345_00160 | GCA_000420345_00166 | Unannotated protein. | Unannotated protein. | 0.711 |
DXC78_01200 | DXC78_01235 | GCA_000420345_00160 | GCA_000420345_00167 | Unannotated protein. | Unannotated protein; May be involved in recombinational repair of damaged DNA. | 0.711 |
DXC78_01200 | dxs | GCA_000420345_00160 | GCA_000420345_00165 | Unannotated protein. | Unannotated protein; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.711 |
DXC78_01200 | nusB | GCA_000420345_00160 | GCA_000420345_00161 | Unannotated protein. | Unannotated protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.776 |
DXC78_01200 | truB | GCA_000420345_00160 | GCA_000420345_00157 | Unannotated protein. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.492 |
DXC78_01200 | xseA | GCA_000420345_00160 | GCA_000420345_00162 | Unannotated protein. | Unannotated protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.776 |
DXC78_01200 | xseB | GCA_000420345_00160 | GCA_000420345_00163 | Unannotated protein. | Unannotated protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.776 |
DXC78_01220 | DXC78_01200 | GCA_000420345_00164 | GCA_000420345_00160 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein. | 0.776 |
DXC78_01220 | DXC78_01230 | GCA_000420345_00164 | GCA_000420345_00166 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein. | 0.865 |
DXC78_01220 | DXC78_01235 | GCA_000420345_00164 | GCA_000420345_00167 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein; May be involved in recombinational repair of damaged DNA. | 0.781 |
DXC78_01220 | dxs | GCA_000420345_00164 | GCA_000420345_00165 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.883 |
DXC78_01220 | nusB | GCA_000420345_00164 | GCA_000420345_00161 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.817 |
DXC78_01220 | truB | GCA_000420345_00164 | GCA_000420345_00157 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.599 |
DXC78_01220 | xseA | GCA_000420345_00164 | GCA_000420345_00162 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.925 |
DXC78_01220 | xseB | GCA_000420345_00164 | GCA_000420345_00163 | Unannotated protein; Belongs to the FPP/GGPP synthase family. | Unannotated protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. | 0.913 |
DXC78_01230 | DXC78_01200 | GCA_000420345_00166 | GCA_000420345_00160 | Unannotated protein. | Unannotated protein. | 0.711 |
DXC78_01230 | DXC78_01220 | GCA_000420345_00166 | GCA_000420345_00164 | Unannotated protein. | Unannotated protein; Belongs to the FPP/GGPP synthase family. | 0.865 |
DXC78_01230 | DXC78_01235 | GCA_000420345_00166 | GCA_000420345_00167 | Unannotated protein. | Unannotated protein; May be involved in recombinational repair of damaged DNA. | 0.815 |
DXC78_01230 | dxs | GCA_000420345_00166 | GCA_000420345_00165 | Unannotated protein. | Unannotated protein; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.890 |
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