Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_01400 | ccpA | GCA_000420345_00190 | GCA_000420345_00195 | Unannotated protein. | Unannotated protein. | 0.426 |
DXC78_01400 | cmk | GCA_000420345_00190 | GCA_000420345_00189 | Unannotated protein. | Unannotated protein. | 0.774 |
DXC78_01400 | der | GCA_000420345_00190 | GCA_000420345_00188 | Unannotated protein. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.748 |
DXC78_01400 | gpsA | GCA_000420345_00190 | GCA_000420345_00187 | Unannotated protein. | Unannotated protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.741 |
DXC78_01400 | hupB_2 | GCA_000420345_00190 | GCA_000420345_00186 | Unannotated protein. | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.741 |
DXC78_01400 | ybeY | GCA_000420345_00190 | GCA_000420345_00194 | Unannotated protein. | Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.545 |
DXC78_11435 | hupB_2 | GCA_000420345_00970 | GCA_000420345_00186 | Unannotated protein. | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.601 |
DXC78_11435 | polA | GCA_000420345_00970 | GCA_000420345_01141 | Unannotated protein. | Unannotated protein; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. | 0.407 |
DXC78_11435 | rpsT | GCA_000420345_00970 | GCA_000420345_00208 | Unannotated protein. | Unannotated protein; Binds directly to 16S ribosomal RNA. | 0.663 |
ccpA | DXC78_01400 | GCA_000420345_00195 | GCA_000420345_00190 | Unannotated protein. | Unannotated protein. | 0.426 |
ccpA | cmk | GCA_000420345_00195 | GCA_000420345_00189 | Unannotated protein. | Unannotated protein. | 0.469 |
ccpA | der | GCA_000420345_00195 | GCA_000420345_00188 | Unannotated protein. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.413 |
ccpA | gpsA | GCA_000420345_00195 | GCA_000420345_00187 | Unannotated protein. | Unannotated protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.411 |
ccpA | hupB_2 | GCA_000420345_00195 | GCA_000420345_00186 | Unannotated protein. | Unannotated protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions. | 0.727 |
ccpA | nusA | GCA_000420345_00195 | GCA_000420345_00103 | Unannotated protein. | Unannotated protein; Participates in both transcription termination and antitermination. | 0.556 |
ccpA | ybeY | GCA_000420345_00195 | GCA_000420345_00194 | Unannotated protein. | Unannotated protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.598 |
cmk | DXC78_01400 | GCA_000420345_00189 | GCA_000420345_00190 | Unannotated protein. | Unannotated protein. | 0.774 |
cmk | ccpA | GCA_000420345_00189 | GCA_000420345_00195 | Unannotated protein. | Unannotated protein. | 0.469 |
cmk | der | GCA_000420345_00189 | GCA_000420345_00188 | Unannotated protein. | Unannotated protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family. | 0.993 |
cmk | gpsA | GCA_000420345_00189 | GCA_000420345_00187 | Unannotated protein. | Unannotated protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. | 0.816 |
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