Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_00310 | DXC78_05270 | GCA_000420345_00415 | GCA_000420345_01985 | Unannotated protein. | Unannotated protein. | 0.695 |
DXC78_00310 | DXC78_12210 | GCA_000420345_00415 | GCA_000420345_01189 | Unannotated protein. | Unannotated protein. | 0.487 |
DXC78_00310 | GCA_000420345_01222 | GCA_000420345_00415 | GCA_000420345_01222 | Unannotated protein. | Unannotated protein. | 0.874 |
DXC78_00310 | cobB | GCA_000420345_00415 | GCA_000420345_01852 | Unannotated protein. | Unannotated protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. | 0.547 |
DXC78_00310 | ddl | GCA_000420345_00415 | GCA_000420345_01485 | Unannotated protein. | Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | 0.839 |
DXC78_00310 | glgA | GCA_000420345_00415 | GCA_000420345_00414 | Unannotated protein. | Unannotated protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | 0.782 |
DXC78_00310 | glgC | GCA_000420345_00415 | GCA_000420345_00412 | Unannotated protein. | Unannotated protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.782 |
DXC78_00310 | glgD | GCA_000420345_00415 | GCA_000420345_00413 | Unannotated protein. | Unannotated protein. | 0.781 |
DXC78_00310 | ptsH | GCA_000420345_00415 | GCA_000420345_00416 | Unannotated protein. | Unannotated protein. | 0.590 |
DXC78_00310 | thiI | GCA_000420345_00415 | GCA_000420345_01035 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. | 0.525 |
DXC78_05270 | DXC78_00310 | GCA_000420345_01985 | GCA_000420345_00415 | Unannotated protein. | Unannotated protein. | 0.695 |
DXC78_12210 | DXC78_00310 | GCA_000420345_01189 | GCA_000420345_00415 | Unannotated protein. | Unannotated protein. | 0.487 |
GCA_000420345_01222 | DXC78_00310 | GCA_000420345_01222 | GCA_000420345_00415 | Unannotated protein. | Unannotated protein. | 0.874 |
GCA_000420345_01222 | cobB | GCA_000420345_01222 | GCA_000420345_01852 | Unannotated protein. | Unannotated protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. | 0.423 |
cobB | DXC78_00310 | GCA_000420345_01852 | GCA_000420345_00415 | Unannotated protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. | Unannotated protein. | 0.547 |
cobB | GCA_000420345_01222 | GCA_000420345_01852 | GCA_000420345_01222 | Unannotated protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily. | Unannotated protein. | 0.423 |
ddl | DXC78_00310 | GCA_000420345_01485 | GCA_000420345_00415 | Unannotated protein; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family. | Unannotated protein. | 0.839 |
glgA | DXC78_00310 | GCA_000420345_00414 | GCA_000420345_00415 | Unannotated protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Unannotated protein. | 0.782 |
glgA | glgC | GCA_000420345_00414 | GCA_000420345_00412 | Unannotated protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Unannotated protein; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.999 |
glgA | glgD | GCA_000420345_00414 | GCA_000420345_00413 | Unannotated protein; Synthesizes alpha-1,4-glucan chains using ADP-glucose. | Unannotated protein. | 0.999 |
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