STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXC78_06845Unannotated protein. (174 aa)    
Predicted Functional Partners:
cobA
Unannotated protein.
    
 0.895
DXC78_06195
Unannotated protein.
  
 0.782
DXC78_08545
Unannotated protein.
    
 0.769
DXC78_01920
Unannotated protein.
  
 0.768
DXC78_03910
Unannotated protein.
  
 0.763
DXC78_02695
Unannotated protein.
  
 0.763
DXC78_11255
Unannotated protein.
  
 0.763
DXC78_04645
Unannotated protein.
  
 0.743
nifJ
Unannotated protein.
  
 
 0.644
GCA_000420345_01368
Unannotated protein.
    
   0.595
Your Current Organism:
Faecalicoccus pleomorphus
NCBI taxonomy Id: 1123313
Other names: F. pleomorphus DSM 20574, Faecalicoccus pleomorphus ATCC 29734, Faecalicoccus pleomorphus CCUG 11733, Faecalicoccus pleomorphus DSM 20574, Faecalicoccus pleomorphus LMG 17756, Streptococcus pleomorphus DSM 20574
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.