STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXC78_05665Unannotated protein. (82 aa)    
Predicted Functional Partners:
DXC78_03735
Unannotated protein.
 
 
 0.860
DXC78_11465
Unannotated protein.
  
 
 0.787
DXC78_05670
Unannotated protein.
       0.775
nifJ
Unannotated protein.
  
  
 0.754
nifJ-2
Unannotated protein.
     
 0.671
pgi
Unannotated protein; Belongs to the GPI family.
  
    0.619
ilvD
Unannotated protein; Belongs to the IlvD/Edd family.
  
 
 0.602
DXC78_08010
Unannotated protein.
  
  
 0.528
DXC78_10965
Unannotated protein; Belongs to the glutamine synthetase family.
     
 0.517
nadE
Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.471
Your Current Organism:
Faecalicoccus pleomorphus
NCBI taxonomy Id: 1123313
Other names: F. pleomorphus DSM 20574, Faecalicoccus pleomorphus ATCC 29734, Faecalicoccus pleomorphus CCUG 11733, Faecalicoccus pleomorphus DSM 20574, Faecalicoccus pleomorphus LMG 17756, Streptococcus pleomorphus DSM 20574
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