Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_03735 | DXC78_05665 | GCA_000420345_01036 | GCA_000420345_00789 | Unannotated protein. | Unannotated protein. | 0.860 |
DXC78_03735 | DXC78_11465 | GCA_000420345_01036 | GCA_000420345_00976 | Unannotated protein. | Unannotated protein. | 0.999 |
DXC78_03735 | nifJ | GCA_000420345_01036 | GCA_000420345_00358 | Unannotated protein. | Unannotated protein. | 0.457 |
DXC78_05665 | DXC78_03735 | GCA_000420345_00789 | GCA_000420345_01036 | Unannotated protein. | Unannotated protein. | 0.860 |
DXC78_05665 | DXC78_05670 | GCA_000420345_00789 | GCA_000420345_00788 | Unannotated protein. | Unannotated protein. | 0.775 |
DXC78_05665 | DXC78_08010 | GCA_000420345_00789 | GCA_000420345_01370 | Unannotated protein. | Unannotated protein. | 0.528 |
DXC78_05665 | DXC78_10965 | GCA_000420345_00789 | GCA_000420345_00026 | Unannotated protein. | Unannotated protein; Belongs to the glutamine synthetase family. | 0.517 |
DXC78_05665 | DXC78_11465 | GCA_000420345_00789 | GCA_000420345_00976 | Unannotated protein. | Unannotated protein. | 0.787 |
DXC78_05665 | ilvD | GCA_000420345_00789 | GCA_000420345_01060 | Unannotated protein. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.602 |
DXC78_05665 | nadE | GCA_000420345_00789 | GCA_000420345_00802 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.471 |
DXC78_05665 | nifJ | GCA_000420345_00789 | GCA_000420345_00358 | Unannotated protein. | Unannotated protein. | 0.754 |
DXC78_05665 | nifJ-2 | GCA_000420345_00789 | GCA_000420345_00786 | Unannotated protein. | Unannotated protein. | 0.671 |
DXC78_05665 | pgi | GCA_000420345_00789 | GCA_000420345_00787 | Unannotated protein. | Unannotated protein; Belongs to the GPI family. | 0.619 |
DXC78_05670 | DXC78_05665 | GCA_000420345_00788 | GCA_000420345_00789 | Unannotated protein. | Unannotated protein. | 0.775 |
DXC78_05670 | pgi | GCA_000420345_00788 | GCA_000420345_00787 | Unannotated protein. | Unannotated protein; Belongs to the GPI family. | 0.626 |
DXC78_08010 | DXC78_05665 | GCA_000420345_01370 | GCA_000420345_00789 | Unannotated protein. | Unannotated protein. | 0.528 |
DXC78_08010 | DXC78_10965 | GCA_000420345_01370 | GCA_000420345_00026 | Unannotated protein. | Unannotated protein; Belongs to the glutamine synthetase family. | 0.478 |
DXC78_08010 | ilvD | GCA_000420345_01370 | GCA_000420345_01060 | Unannotated protein. | Unannotated protein; Belongs to the IlvD/Edd family. | 0.495 |
DXC78_08010 | nadE | GCA_000420345_01370 | GCA_000420345_00802 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.427 |
DXC78_08010 | nifJ | GCA_000420345_01370 | GCA_000420345_00358 | Unannotated protein. | Unannotated protein. | 0.997 |
page 1 of 4