STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXC78_03330Unannotated protein. (770 aa)    
Predicted Functional Partners:
DXC78_03335
Unannotated protein.
   
 0.993
DXC78_03340
Unannotated protein.
 
  
 0.898
DXC78_03095
Unannotated protein.
  
     0.673
DXC78_11885
Unannotated protein.
  
     0.570
DXC78_11935
Unannotated protein.
  
     0.544
DXC78_00770
Unannotated protein.
  
     0.527
vanT
Unannotated protein.
 
     0.518
srtB-2
Unannotated protein.
  
   
 0.508
DXC78_11430
Unannotated protein.
 
    0.476
DXC78_03945
Unannotated protein.
 
    0.470
Your Current Organism:
Faecalicoccus pleomorphus
NCBI taxonomy Id: 1123313
Other names: F. pleomorphus DSM 20574, Faecalicoccus pleomorphus ATCC 29734, Faecalicoccus pleomorphus CCUG 11733, Faecalicoccus pleomorphus DSM 20574, Faecalicoccus pleomorphus LMG 17756, Streptococcus pleomorphus DSM 20574
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