Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_00465 | DXC78_11855 | GCA_000420345_01090 | GCA_000420345_00940 | Unannotated protein. | Unannotated protein. | 0.862 |
DXC78_00465 | alaS | GCA_000420345_01090 | GCA_000420345_00217 | Unannotated protein. | Unannotated protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.685 |
DXC78_00465 | dnaK | GCA_000420345_01090 | GCA_000420345_00581 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.780 |
DXC78_00465 | htpG | GCA_000420345_01090 | GCA_000420345_00394 | Unannotated protein. | Unannotated protein; Molecular chaperone. Has ATPase activity. | 0.743 |
DXC78_00465 | rpoB | GCA_000420345_01090 | GCA_000420345_00603 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.537 |
DXC78_11855 | DXC78_00465 | GCA_000420345_00940 | GCA_000420345_01090 | Unannotated protein. | Unannotated protein. | 0.862 |
DXC78_11855 | DXC78_11860 | GCA_000420345_00940 | GCA_000420345_00941 | Unannotated protein. | Unannotated protein. | 0.971 |
DXC78_11855 | GCA_000420345_01783 | GCA_000420345_00940 | GCA_000420345_01783 | Unannotated protein. | Unannotated protein. | 0.822 |
DXC78_11855 | GCA_000420345_01894 | GCA_000420345_00940 | GCA_000420345_01894 | Unannotated protein. | Unannotated protein. | 0.862 |
DXC78_11855 | alaS | GCA_000420345_00940 | GCA_000420345_00217 | Unannotated protein. | Unannotated protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.911 |
DXC78_11855 | dnaK | GCA_000420345_00940 | GCA_000420345_00581 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.900 |
DXC78_11855 | htpG | GCA_000420345_00940 | GCA_000420345_00394 | Unannotated protein. | Unannotated protein; Molecular chaperone. Has ATPase activity. | 0.922 |
DXC78_11855 | rpoA | GCA_000420345_00940 | GCA_000420345_00448 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.807 |
DXC78_11855 | rpoA-2 | GCA_000420345_00940 | GCA_000420345_01954 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.807 |
DXC78_11855 | rpoB | GCA_000420345_00940 | GCA_000420345_00603 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.860 |
DXC78_11860 | DXC78_11855 | GCA_000420345_00941 | GCA_000420345_00940 | Unannotated protein. | Unannotated protein. | 0.971 |
GCA_000420345_01783 | DXC78_11855 | GCA_000420345_01783 | GCA_000420345_00940 | Unannotated protein. | Unannotated protein. | 0.822 |
GCA_000420345_01783 | alaS | GCA_000420345_01783 | GCA_000420345_00217 | Unannotated protein. | Unannotated protein; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.526 |
GCA_000420345_01783 | dnaK | GCA_000420345_01783 | GCA_000420345_00581 | Unannotated protein. | Unannotated protein; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.922 |
GCA_000420345_01783 | rpoA | GCA_000420345_01783 | GCA_000420345_00448 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.653 |
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