Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_05340 | DXC78_05345 | GCA_000420345_01074 | GCA_000420345_01075 | Unannotated protein. | Unannotated protein. | 0.792 |
DXC78_05340 | DXC78_05350 | GCA_000420345_01074 | GCA_000420345_01076 | Unannotated protein. | Unannotated protein. | 0.774 |
DXC78_05340 | ispE | GCA_000420345_01074 | GCA_000420345_01077 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.782 |
DXC78_05340 | rnmV | GCA_000420345_01074 | GCA_000420345_01079 | Unannotated protein. | Unannotated protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.776 |
DXC78_05340 | rsmA | GCA_000420345_01074 | GCA_000420345_01078 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.778 |
DXC78_05345 | DXC78_05340 | GCA_000420345_01075 | GCA_000420345_01074 | Unannotated protein. | Unannotated protein. | 0.792 |
DXC78_05345 | DXC78_05350 | GCA_000420345_01075 | GCA_000420345_01076 | Unannotated protein. | Unannotated protein. | 0.774 |
DXC78_05345 | ispE | GCA_000420345_01075 | GCA_000420345_01077 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.783 |
DXC78_05345 | rnmV | GCA_000420345_01075 | GCA_000420345_01079 | Unannotated protein. | Unannotated protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.779 |
DXC78_05345 | rsmA | GCA_000420345_01075 | GCA_000420345_01078 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.792 |
DXC78_05350 | DXC78_05340 | GCA_000420345_01076 | GCA_000420345_01074 | Unannotated protein. | Unannotated protein. | 0.774 |
DXC78_05350 | DXC78_05345 | GCA_000420345_01076 | GCA_000420345_01075 | Unannotated protein. | Unannotated protein. | 0.774 |
DXC78_05350 | ispE | GCA_000420345_01076 | GCA_000420345_01077 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.774 |
DXC78_05350 | rnmV | GCA_000420345_01076 | GCA_000420345_01079 | Unannotated protein. | Unannotated protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.774 |
DXC78_05350 | rsmA | GCA_000420345_01076 | GCA_000420345_01078 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.774 |
dxr | ispD | GCA_000420345_00521 | GCA_000420345_01927 | Unannotated protein; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Unannotated protein. | 0.985 |
dxr | ispE | GCA_000420345_00521 | GCA_000420345_01077 | Unannotated protein; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.781 |
dxr | ispF | GCA_000420345_00521 | GCA_000420345_00891 | Unannotated protein; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Unannotated protein; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). | 0.921 |
dxr | ispG | GCA_000420345_00521 | GCA_000420345_01022 | Unannotated protein; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Unannotated protein; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.824 |
dxr | ispH | GCA_000420345_00521 | GCA_000420345_01025 | Unannotated protein; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Unannotated protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.818 |
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