Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_05340 | DXC78_05345 | GCA_000420345_01074 | GCA_000420345_01075 | Unannotated protein. | Unannotated protein. | 0.792 |
DXC78_05340 | DXC78_05350 | GCA_000420345_01074 | GCA_000420345_01076 | Unannotated protein. | Unannotated protein. | 0.774 |
DXC78_05340 | GCA_000420345_01073 | GCA_000420345_01074 | GCA_000420345_01073 | Unannotated protein. | Unannotated protein. | 0.634 |
DXC78_05340 | ispE | GCA_000420345_01074 | GCA_000420345_01077 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.782 |
DXC78_05340 | rnmV | GCA_000420345_01074 | GCA_000420345_01079 | Unannotated protein. | Unannotated protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.776 |
DXC78_05340 | rsmA | GCA_000420345_01074 | GCA_000420345_01078 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.778 |
DXC78_05345 | DXC78_05340 | GCA_000420345_01075 | GCA_000420345_01074 | Unannotated protein. | Unannotated protein. | 0.792 |
DXC78_05345 | DXC78_05350 | GCA_000420345_01075 | GCA_000420345_01076 | Unannotated protein. | Unannotated protein. | 0.774 |
DXC78_05345 | GCA_000420345_01073 | GCA_000420345_01075 | GCA_000420345_01073 | Unannotated protein. | Unannotated protein. | 0.634 |
DXC78_05345 | ispE | GCA_000420345_01075 | GCA_000420345_01077 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.783 |
DXC78_05345 | rnmV | GCA_000420345_01075 | GCA_000420345_01079 | Unannotated protein. | Unannotated protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.779 |
DXC78_05345 | rsmA | GCA_000420345_01075 | GCA_000420345_01078 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.792 |
DXC78_05350 | DXC78_05340 | GCA_000420345_01076 | GCA_000420345_01074 | Unannotated protein. | Unannotated protein. | 0.774 |
DXC78_05350 | DXC78_05345 | GCA_000420345_01076 | GCA_000420345_01075 | Unannotated protein. | Unannotated protein. | 0.774 |
DXC78_05350 | GCA_000420345_01073 | GCA_000420345_01076 | GCA_000420345_01073 | Unannotated protein. | Unannotated protein. | 0.634 |
DXC78_05350 | ispE | GCA_000420345_01076 | GCA_000420345_01077 | Unannotated protein. | Unannotated protein; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.774 |
DXC78_05350 | rnmV | GCA_000420345_01076 | GCA_000420345_01079 | Unannotated protein. | Unannotated protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.774 |
DXC78_05350 | rsmA | GCA_000420345_01076 | GCA_000420345_01078 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.774 |
DXC78_10825 | rnmV | GCA_000420345_01024 | GCA_000420345_01079 | Unannotated protein. | Unannotated protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step. | 0.514 |
DXC78_10825 | rsmA | GCA_000420345_01024 | GCA_000420345_01078 | Unannotated protein. | Unannotated protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.615 |
page 1 of 3