STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420345_01129Unannotated protein. (281 aa)    
Predicted Functional Partners:
GCA_000420345_01124
Unannotated protein.
 
 0.999
atpE
Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
 
 0.999
GCA_000420345_01126
Unannotated protein.
 
 0.999
GCA_000420345_01127
Unannotated protein.
 
 0.999
atpA
Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.
 
 0.999
atpD
Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.
 
 0.999
GCA_000420345_01131
Unannotated protein.
 
 0.999
lysS
Unannotated protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.959
rpsC
Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.937
DXC78_05075
Unannotated protein.
  
 
 0.914
Your Current Organism:
Faecalicoccus pleomorphus
NCBI taxonomy Id: 1123313
Other names: F. pleomorphus DSM 20574, Faecalicoccus pleomorphus ATCC 29734, Faecalicoccus pleomorphus CCUG 11733, Faecalicoccus pleomorphus DSM 20574, Faecalicoccus pleomorphus LMG 17756, Streptococcus pleomorphus DSM 20574
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