Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_05075 | GCA_000420345_01124 | GCA_000420345_01693 | GCA_000420345_01124 | Unannotated protein. | Unannotated protein. | 0.874 |
DXC78_05075 | GCA_000420345_01126 | GCA_000420345_01693 | GCA_000420345_01126 | Unannotated protein. | Unannotated protein. | 0.801 |
DXC78_05075 | GCA_000420345_01127 | GCA_000420345_01693 | GCA_000420345_01127 | Unannotated protein. | Unannotated protein. | 0.884 |
DXC78_05075 | GCA_000420345_01129 | GCA_000420345_01693 | GCA_000420345_01129 | Unannotated protein. | Unannotated protein. | 0.914 |
DXC78_05075 | GCA_000420345_01131 | GCA_000420345_01693 | GCA_000420345_01131 | Unannotated protein. | Unannotated protein. | 0.864 |
DXC78_05075 | atpA | GCA_000420345_01693 | GCA_000420345_01128 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.888 |
DXC78_05075 | atpD | GCA_000420345_01693 | GCA_000420345_01130 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.885 |
DXC78_05075 | atpE | GCA_000420345_01693 | GCA_000420345_01125 | Unannotated protein. | Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.897 |
DXC78_05075 | lysS | GCA_000420345_01693 | GCA_000420345_01859 | Unannotated protein. | Unannotated protein; Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.492 |
DXC78_05075 | rpsC | GCA_000420345_01693 | GCA_000420345_00465 | Unannotated protein. | Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.534 |
GCA_000420345_01124 | DXC78_05075 | GCA_000420345_01124 | GCA_000420345_01693 | Unannotated protein. | Unannotated protein. | 0.874 |
GCA_000420345_01124 | GCA_000420345_01126 | GCA_000420345_01124 | GCA_000420345_01126 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000420345_01124 | GCA_000420345_01127 | GCA_000420345_01124 | GCA_000420345_01127 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000420345_01124 | GCA_000420345_01129 | GCA_000420345_01124 | GCA_000420345_01129 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000420345_01124 | GCA_000420345_01131 | GCA_000420345_01124 | GCA_000420345_01131 | Unannotated protein. | Unannotated protein. | 0.999 |
GCA_000420345_01124 | atpA | GCA_000420345_01124 | GCA_000420345_01128 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. | 0.999 |
GCA_000420345_01124 | atpD | GCA_000420345_01124 | GCA_000420345_01130 | Unannotated protein. | Unannotated protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits. | 0.999 |
GCA_000420345_01124 | atpE | GCA_000420345_01124 | GCA_000420345_01125 | Unannotated protein. | Unannotated protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. | 0.999 |
GCA_000420345_01124 | rpsC | GCA_000420345_01124 | GCA_000420345_00465 | Unannotated protein. | Unannotated protein; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family. | 0.589 |
GCA_000420345_01126 | DXC78_05075 | GCA_000420345_01126 | GCA_000420345_01693 | Unannotated protein. | Unannotated protein. | 0.801 |
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