Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_08545 | GCA_000420345_01158 | GCA_000420345_01300 | GCA_000420345_01158 | Unannotated protein. | Unannotated protein. | 0.770 |
DXC78_08545 | GCA_000420345_01159 | GCA_000420345_01300 | GCA_000420345_01159 | Unannotated protein. | Unannotated protein. | 0.770 |
DXC78_10980 | GCA_000420345_01158 | GCA_000420345_00023 | GCA_000420345_01158 | Unannotated protein. | Unannotated protein. | 0.852 |
DXC78_10980 | GCA_000420345_01159 | GCA_000420345_00023 | GCA_000420345_01159 | Unannotated protein. | Unannotated protein. | 0.852 |
DXC78_10980 | GCA_000420345_01783 | GCA_000420345_00023 | GCA_000420345_01783 | Unannotated protein. | Unannotated protein. | 0.449 |
DXC78_10980 | nifJ | GCA_000420345_00023 | GCA_000420345_00358 | Unannotated protein. | Unannotated protein. | 0.956 |
DXC78_10980 | nifJ-2 | GCA_000420345_00023 | GCA_000420345_00786 | Unannotated protein. | Unannotated protein. | 0.948 |
DXC78_10980 | rpoB | GCA_000420345_00023 | GCA_000420345_00603 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.534 |
DXC78_10980 | rpoC | GCA_000420345_00023 | GCA_000420345_00602 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.509 |
GCA_000420345_01158 | DXC78_08545 | GCA_000420345_01158 | GCA_000420345_01300 | Unannotated protein. | Unannotated protein. | 0.770 |
GCA_000420345_01158 | DXC78_10980 | GCA_000420345_01158 | GCA_000420345_00023 | Unannotated protein. | Unannotated protein. | 0.852 |
GCA_000420345_01158 | GCA_000420345_01159 | GCA_000420345_01158 | GCA_000420345_01159 | Unannotated protein. | Unannotated protein. | 0.773 |
GCA_000420345_01158 | GCA_000420345_01783 | GCA_000420345_01158 | GCA_000420345_01783 | Unannotated protein. | Unannotated protein. | 0.668 |
GCA_000420345_01158 | nifJ | GCA_000420345_01158 | GCA_000420345_00358 | Unannotated protein. | Unannotated protein. | 0.859 |
GCA_000420345_01158 | nifJ-2 | GCA_000420345_01158 | GCA_000420345_00786 | Unannotated protein. | Unannotated protein. | 0.866 |
GCA_000420345_01158 | rpoA | GCA_000420345_01158 | GCA_000420345_00448 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.575 |
GCA_000420345_01158 | rpoA-2 | GCA_000420345_01158 | GCA_000420345_01954 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.575 |
GCA_000420345_01158 | rpoB | GCA_000420345_01158 | GCA_000420345_00603 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.526 |
GCA_000420345_01158 | rpoC | GCA_000420345_01158 | GCA_000420345_00602 | Unannotated protein. | Unannotated protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.499 |
GCA_000420345_01159 | DXC78_08545 | GCA_000420345_01159 | GCA_000420345_01300 | Unannotated protein. | Unannotated protein. | 0.770 |
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