STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXC78_04865Unannotated protein. (333 aa)    
Predicted Functional Partners:
DXC78_04860
Unannotated protein.
  
    0.724
DXC78_07525
Unannotated protein.
  
 
 0.723
DXC78_04535
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
  
 
 0.715
cobB
Unannotated protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.
   
 0.703
DXC78_04855
Unannotated protein.
 
  
 0.610
DXC78_05805
Unannotated protein.
  
 
 0.598
DXC78_04845
Unannotated protein.
     
 0.543
DXC78_08075
Unannotated protein.
 
 
 0.543
lysS
Unannotated protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.543
DXC78_02065
Unannotated protein.
 
 
 0.520
Your Current Organism:
Faecalicoccus pleomorphus
NCBI taxonomy Id: 1123313
Other names: F. pleomorphus DSM 20574, Faecalicoccus pleomorphus ATCC 29734, Faecalicoccus pleomorphus CCUG 11733, Faecalicoccus pleomorphus DSM 20574, Faecalicoccus pleomorphus LMG 17756, Streptococcus pleomorphus DSM 20574
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.