STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXC78_09565Unannotated protein. (265 aa)    
Predicted Functional Partners:
DXC78_09560
Unannotated protein.
       0.773
GCA_000420345_01240
Unannotated protein.
    
  0.635
pfkB
Unannotated protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
 
  
 0.606
DXC78_05270
Unannotated protein.
    
   0.499
lacB
Unannotated protein.
  
 
 0.491
fabG
Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 0.446
DXC78_02660
Unannotated protein.
  
  
 0.446
DXC78_09595
Unannotated protein.
  
  
 0.446
DXC78_05805
Unannotated protein.
  
 
 0.434
DXC78_04435
Unannotated protein.
  
 
 0.422
Your Current Organism:
Faecalicoccus pleomorphus
NCBI taxonomy Id: 1123313
Other names: F. pleomorphus DSM 20574, Faecalicoccus pleomorphus ATCC 29734, Faecalicoccus pleomorphus CCUG 11733, Faecalicoccus pleomorphus DSM 20574, Faecalicoccus pleomorphus LMG 17756, Streptococcus pleomorphus DSM 20574
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