Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DXC78_00425 | DXC78_03860 | GCA_000420345_00439 | GCA_000420345_01058 | Unannotated protein. | Unannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.879 |
| DXC78_00425 | DXC78_04470 | GCA_000420345_00439 | GCA_000420345_01880 | Unannotated protein. | Unannotated protein. | 0.629 |
| DXC78_00425 | DXC78_04535 | GCA_000420345_00439 | GCA_000420345_00654 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.667 |
| DXC78_00425 | DXC78_08100 | GCA_000420345_00439 | GCA_000420345_01387 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.671 |
| DXC78_00425 | DXC78_10205 | GCA_000420345_00439 | GCA_000420345_01254 | Unannotated protein. | Unannotated protein. | 0.561 |
| DXC78_00425 | GCA_000420345_01248 | GCA_000420345_00439 | GCA_000420345_01248 | Unannotated protein. | Unannotated protein. | 0.647 |
| DXC78_00425 | GCA_000420345_01249 | GCA_000420345_00439 | GCA_000420345_01249 | Unannotated protein. | Unannotated protein. | 0.647 |
| DXC78_00425 | cysK | GCA_000420345_00439 | GCA_000420345_01638 | Unannotated protein. | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.628 |
| DXC78_02545 | DXC78_03860 | GCA_000420345_00717 | GCA_000420345_01058 | Unannotated protein. | Unannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.932 |
| DXC78_02545 | DXC78_04535 | GCA_000420345_00717 | GCA_000420345_00654 | Unannotated protein. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.921 |
| DXC78_02545 | DXC78_08100 | GCA_000420345_00717 | GCA_000420345_01387 | Unannotated protein. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.435 |
| DXC78_02545 | DXC78_10205 | GCA_000420345_00717 | GCA_000420345_01254 | Unannotated protein. | Unannotated protein. | 0.884 |
| DXC78_02545 | GCA_000420345_01248 | GCA_000420345_00717 | GCA_000420345_01248 | Unannotated protein. | Unannotated protein. | 0.792 |
| DXC78_02545 | GCA_000420345_01249 | GCA_000420345_00717 | GCA_000420345_01249 | Unannotated protein. | Unannotated protein. | 0.792 |
| DXC78_02545 | cysK | GCA_000420345_00717 | GCA_000420345_01638 | Unannotated protein. | Unannotated protein; Belongs to the cysteine synthase/cystathionine beta- synthase family. | 0.918 |
| DXC78_03860 | DXC78_00425 | GCA_000420345_01058 | GCA_000420345_00439 | Unannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Unannotated protein. | 0.879 |
| DXC78_03860 | DXC78_02545 | GCA_000420345_01058 | GCA_000420345_00717 | Unannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Unannotated protein. | 0.932 |
| DXC78_03860 | DXC78_04470 | GCA_000420345_01058 | GCA_000420345_01880 | Unannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Unannotated protein. | 0.446 |
| DXC78_03860 | DXC78_04535 | GCA_000420345_01058 | GCA_000420345_00654 | Unannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Unannotated protein; Belongs to the aldehyde dehydrogenase family. | 0.908 |
| DXC78_03860 | DXC78_08100 | GCA_000420345_01058 | GCA_000420345_01387 | Unannotated protein; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.884 |
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