Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_02545 | DXC78_02895 | GCA_000420345_00717 | GCA_000420345_00855 | Unannotated protein. | Unannotated protein. | 0.846 |
DXC78_02545 | DXC78_10295 | GCA_000420345_00717 | GCA_000420345_01270 | Unannotated protein. | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.842 |
DXC78_02545 | GCA_000420345_00838 | GCA_000420345_00717 | GCA_000420345_00838 | Unannotated protein. | Unannotated protein. | 0.842 |
DXC78_02545 | rfbD | GCA_000420345_00717 | GCA_000420345_01585 | Unannotated protein. | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.842 |
DXC78_02895 | DXC78_02545 | GCA_000420345_00855 | GCA_000420345_00717 | Unannotated protein. | Unannotated protein. | 0.846 |
DXC78_02895 | DXC78_10295 | GCA_000420345_00855 | GCA_000420345_01270 | Unannotated protein. | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.789 |
DXC78_02895 | GCA_000420345_00837 | GCA_000420345_00855 | GCA_000420345_00837 | Unannotated protein. | Unannotated protein. | 0.735 |
DXC78_02895 | GCA_000420345_00838 | GCA_000420345_00855 | GCA_000420345_00838 | Unannotated protein. | Unannotated protein. | 0.789 |
DXC78_02895 | GCA_000420345_00839 | GCA_000420345_00855 | GCA_000420345_00839 | Unannotated protein. | Unannotated protein. | 0.547 |
DXC78_02895 | rfbB | GCA_000420345_00855 | GCA_000420345_01581 | Unannotated protein. | Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.547 |
DXC78_02895 | rfbC | GCA_000420345_00855 | GCA_000420345_01579 | Unannotated protein. | Unannotated protein; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. | 0.735 |
DXC78_02895 | rfbD | GCA_000420345_00855 | GCA_000420345_01585 | Unannotated protein. | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.789 |
DXC78_10295 | DXC78_02545 | GCA_000420345_01270 | GCA_000420345_00717 | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Unannotated protein. | 0.842 |
DXC78_10295 | DXC78_02895 | GCA_000420345_01270 | GCA_000420345_00855 | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Unannotated protein. | 0.789 |
DXC78_10295 | GCA_000420345_00837 | GCA_000420345_01270 | GCA_000420345_00837 | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Unannotated protein. | 0.922 |
DXC78_10295 | GCA_000420345_00838 | GCA_000420345_01270 | GCA_000420345_00838 | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Unannotated protein. | 0.776 |
DXC78_10295 | GCA_000420345_00839 | GCA_000420345_01270 | GCA_000420345_00839 | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Unannotated protein. | 0.723 |
DXC78_10295 | GCA_000420345_01271 | GCA_000420345_01270 | GCA_000420345_01271 | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Unannotated protein. | 0.779 |
DXC78_10295 | deoC | GCA_000420345_01270 | GCA_000420345_01269 | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Unannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.773 |
DXC78_10295 | rfbB | GCA_000420345_01270 | GCA_000420345_01581 | Unannotated protein; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | Unannotated protein; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.723 |
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