Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_02660 | DXC78_04435 | GCA_000420345_00694 | GCA_000420345_01886 | Unannotated protein. | Unannotated protein. | 0.526 |
DXC78_02660 | DXC78_05805 | GCA_000420345_00694 | GCA_000420345_01599 | Unannotated protein. | Unannotated protein. | 0.551 |
DXC78_02660 | DXC78_10330 | GCA_000420345_00694 | GCA_000420345_01276 | Unannotated protein. | Unannotated protein. | 0.446 |
DXC78_02660 | lacB | GCA_000420345_00694 | GCA_000420345_01899 | Unannotated protein. | Unannotated protein. | 0.596 |
DXC78_02660 | pfkB | GCA_000420345_00694 | GCA_000420345_00593 | Unannotated protein. | Unannotated protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.757 |
DXC78_04435 | DXC78_02660 | GCA_000420345_01886 | GCA_000420345_00694 | Unannotated protein. | Unannotated protein. | 0.526 |
DXC78_04435 | DXC78_05805 | GCA_000420345_01886 | GCA_000420345_01599 | Unannotated protein. | Unannotated protein. | 0.535 |
DXC78_04435 | DXC78_09595 | GCA_000420345_01886 | GCA_000420345_01231 | Unannotated protein. | Unannotated protein. | 0.526 |
DXC78_04435 | DXC78_10330 | GCA_000420345_01886 | GCA_000420345_01276 | Unannotated protein. | Unannotated protein. | 0.422 |
DXC78_04435 | deoC-2 | GCA_000420345_01886 | GCA_000420345_01277 | Unannotated protein. | Unannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.469 |
DXC78_04435 | fabG | GCA_000420345_01886 | GCA_000420345_00680 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.526 |
DXC78_04435 | lacB | GCA_000420345_01886 | GCA_000420345_01899 | Unannotated protein. | Unannotated protein. | 0.640 |
DXC78_04435 | pfkB | GCA_000420345_01886 | GCA_000420345_00593 | Unannotated protein. | Unannotated protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily. | 0.537 |
DXC78_05270 | DXC78_10330 | GCA_000420345_01985 | GCA_000420345_01276 | Unannotated protein. | Unannotated protein. | 0.499 |
DXC78_05805 | DXC78_02660 | GCA_000420345_01599 | GCA_000420345_00694 | Unannotated protein. | Unannotated protein. | 0.551 |
DXC78_05805 | DXC78_04435 | GCA_000420345_01599 | GCA_000420345_01886 | Unannotated protein. | Unannotated protein. | 0.535 |
DXC78_05805 | DXC78_09595 | GCA_000420345_01599 | GCA_000420345_01231 | Unannotated protein. | Unannotated protein. | 0.551 |
DXC78_05805 | DXC78_10330 | GCA_000420345_01599 | GCA_000420345_01276 | Unannotated protein. | Unannotated protein. | 0.434 |
DXC78_05805 | deoC-2 | GCA_000420345_01599 | GCA_000420345_01277 | Unannotated protein. | Unannotated protein; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.438 |
DXC78_05805 | fabG | GCA_000420345_01599 | GCA_000420345_00680 | Unannotated protein. | Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.551 |
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