Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_00870 | DXC78_08535 | GCA_000420345_01117 | GCA_000420345_01298 | Unannotated protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | Unannotated protein. | 0.422 |
DXC78_08485 | DXC78_08535 | GCA_000420345_01291 | GCA_000420345_01298 | Unannotated protein; Belongs to the Fur family. | Unannotated protein. | 0.452 |
DXC78_08485 | def | GCA_000420345_01291 | GCA_000420345_00919 | Unannotated protein; Belongs to the Fur family. | Unannotated protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.510 |
DXC78_08530 | DXC78_08535 | GCA_000420345_01297 | GCA_000420345_01298 | Unannotated protein. | Unannotated protein. | 0.414 |
DXC78_08535 | DXC78_00870 | GCA_000420345_01298 | GCA_000420345_01117 | Unannotated protein. | Unannotated protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. | 0.422 |
DXC78_08535 | DXC78_08485 | GCA_000420345_01298 | GCA_000420345_01291 | Unannotated protein. | Unannotated protein; Belongs to the Fur family. | 0.452 |
DXC78_08535 | DXC78_08530 | GCA_000420345_01298 | GCA_000420345_01297 | Unannotated protein. | Unannotated protein. | 0.414 |
DXC78_08535 | DXC78_08540 | GCA_000420345_01298 | GCA_000420345_01299 | Unannotated protein. | Unannotated protein. | 0.537 |
DXC78_08535 | def | GCA_000420345_01298 | GCA_000420345_00919 | Unannotated protein. | Unannotated protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.491 |
DXC78_08540 | DXC78_08535 | GCA_000420345_01299 | GCA_000420345_01298 | Unannotated protein. | Unannotated protein. | 0.537 |
def | DXC78_08485 | GCA_000420345_00919 | GCA_000420345_01291 | Unannotated protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Unannotated protein; Belongs to the Fur family. | 0.510 |
def | DXC78_08535 | GCA_000420345_00919 | GCA_000420345_01298 | Unannotated protein; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | Unannotated protein. | 0.491 |