STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXC78_08875Unannotated protein. (743 aa)    
Predicted Functional Partners:
DXC78_08860
Unannotated protein.
 
  
 0.943
DXC78_08865
Unannotated protein.
 
 
 0.940
tagD
Unannotated protein.
 
  
 0.933
DXC78_09140
Unannotated protein.
  
0.915
DXC78_08885
Unannotated protein.
 
 
0.892
DXC78_08880
Unannotated protein.
 
  
0.807
GCA_000420345_01571
Unannotated protein.
 
 
 0.593
GCA_000420345_01572
Unannotated protein.
 
  
 0.553
yidC
Unannotated protein.
    
  0.547
rpoE
Unannotated protein; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.
       0.493
Your Current Organism:
Faecalicoccus pleomorphus
NCBI taxonomy Id: 1123313
Other names: F. pleomorphus DSM 20574, Faecalicoccus pleomorphus ATCC 29734, Faecalicoccus pleomorphus CCUG 11733, Faecalicoccus pleomorphus DSM 20574, Faecalicoccus pleomorphus LMG 17756, Streptococcus pleomorphus DSM 20574
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.