STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DXC78_12500Unannotated protein; Belongs to the glycerate kinase type-1 family. (379 aa)    
Predicted Functional Partners:
DXC78_08100
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
  
 0.890
DXC78_05085
Unannotated protein; Belongs to the glycerate kinase type-1 family.
  
  
 
0.848
DXC78_02665
Unannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.
     
 0.811
tadA
Unannotated protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.811
DXC78_04535
Unannotated protein; Belongs to the aldehyde dehydrogenase family.
   
 
 0.810
gpmA
Unannotated protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.805
DXC78_12495
Unannotated protein; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.780
DXC78_12705
Unannotated protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.721
DXC78_12505
Unannotated protein.
       0.628
DXC78_12515
Unannotated protein.
  
  
 0.624
Your Current Organism:
Faecalicoccus pleomorphus
NCBI taxonomy Id: 1123313
Other names: F. pleomorphus DSM 20574, Faecalicoccus pleomorphus ATCC 29734, Faecalicoccus pleomorphus CCUG 11733, Faecalicoccus pleomorphus DSM 20574, Faecalicoccus pleomorphus LMG 17756, Streptococcus pleomorphus DSM 20574
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.