STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420345_01572Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000420345_01571
Unannotated protein.
 0.995
DXC78_08865
Unannotated protein.
 0.982
GCA_000420345_01573
Unannotated protein.
 
  
 0.960
GCA_000420345_01574
Unannotated protein.
 
  
 0.781
DXC78_05910
Unannotated protein.
   
 
 0.701
GCA_000420345_01575
Unannotated protein.
       0.649
GCA_000420345_01576
Unannotated protein.
       0.631
GCA_000420345_01583
Unannotated protein.
 
  
 0.558
DXC78_08875
Unannotated protein.
 
  
 0.553
rfbA
Unannotated protein; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.
     
 0.549
Your Current Organism:
Faecalicoccus pleomorphus
NCBI taxonomy Id: 1123313
Other names: F. pleomorphus DSM 20574, Faecalicoccus pleomorphus ATCC 29734, Faecalicoccus pleomorphus CCUG 11733, Faecalicoccus pleomorphus DSM 20574, Faecalicoccus pleomorphus LMG 17756, Streptococcus pleomorphus DSM 20574
Server load: low (14%) [HD]