Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DXC78_04525 | DXC78_11160 | GCA_000420345_00652 | GCA_000420345_01166 | Unannotated protein. | Unannotated protein; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. | 0.539 |
DXC78_04525 | carA | GCA_000420345_00652 | GCA_000420345_01908 | Unannotated protein. | Unannotated protein; Belongs to the CarA family. | 0.802 |
DXC78_04525 | carB | GCA_000420345_00652 | GCA_000420345_01907 | Unannotated protein. | Unannotated protein; Belongs to the CarB family. | 0.791 |
DXC78_04525 | pyrB | GCA_000420345_00652 | GCA_000420345_01910 | Unannotated protein. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.944 |
DXC78_04525 | pyrC | GCA_000420345_00652 | GCA_000420345_01909 | Unannotated protein. | Unannotated protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily. | 0.940 |
DXC78_04525 | pyrD | GCA_000420345_00652 | GCA_000420345_01905 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate. | 0.809 |
DXC78_04525 | pyrE | GCA_000420345_00652 | GCA_000420345_00708 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.820 |
DXC78_04525 | pyrF | GCA_000420345_00652 | GCA_000420345_01904 | Unannotated protein. | Unannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.820 |
DXC78_04525 | pyrK | GCA_000420345_00652 | GCA_000420345_01906 | Unannotated protein. | Unannotated protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | 0.736 |
DXC78_11160 | DXC78_04525 | GCA_000420345_01166 | GCA_000420345_00652 | Unannotated protein; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. | Unannotated protein. | 0.539 |
DXC78_11160 | carA | GCA_000420345_01166 | GCA_000420345_01908 | Unannotated protein; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. | Unannotated protein; Belongs to the CarA family. | 0.732 |
DXC78_11160 | carB | GCA_000420345_01166 | GCA_000420345_01907 | Unannotated protein; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. | Unannotated protein; Belongs to the CarB family. | 0.603 |
DXC78_11160 | pyrB | GCA_000420345_01166 | GCA_000420345_01910 | Unannotated protein; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.973 |
DXC78_11160 | pyrD | GCA_000420345_01166 | GCA_000420345_01905 | Unannotated protein; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. | Unannotated protein; Catalyzes the conversion of dihydroorotate to orotate. | 0.854 |
DXC78_11160 | pyrE | GCA_000420345_01166 | GCA_000420345_00708 | Unannotated protein; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. | Unannotated protein; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.830 |
DXC78_11160 | pyrF | GCA_000420345_01166 | GCA_000420345_01904 | Unannotated protein; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. | Unannotated protein; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. | 0.732 |
DXC78_11160 | pyrK | GCA_000420345_01166 | GCA_000420345_01906 | Unannotated protein; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. | Unannotated protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+). | 0.720 |
arcB | carA | GCA_000420345_00282 | GCA_000420345_01908 | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Unannotated protein; Belongs to the CarA family. | 0.996 |
arcB | carB | GCA_000420345_00282 | GCA_000420345_01907 | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Unannotated protein; Belongs to the CarB family. | 0.995 |
arcB | pyrB | GCA_000420345_00282 | GCA_000420345_01910 | Unannotated protein; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline. | Unannotated protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family. | 0.893 |
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