STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000420345_01944Unannotated protein. (411 aa)    
Predicted Functional Partners:
GCA_000420345_01943
Unannotated protein.
 
 0.985
GCA_000420345_01941
Unannotated protein.
 
  
 0.919
DXC78_00800
Unannotated protein.
 
 0.852
DXC78_12225
Unannotated protein.
 
 0.833
GCA_000420345_00348
Unannotated protein.
  
 0.813
DXC78_06040
Unannotated protein.
  
 0.813
DXC78_04985
Unannotated protein.
  
 0.812
GCA_000420345_01942
Unannotated protein.
       0.793
DXC78_11210
Unannotated protein.
  
     0.486
GCA_000420345_01992
Unannotated protein.
  
     0.472
Your Current Organism:
Faecalicoccus pleomorphus
NCBI taxonomy Id: 1123313
Other names: F. pleomorphus DSM 20574, Faecalicoccus pleomorphus ATCC 29734, Faecalicoccus pleomorphus CCUG 11733, Faecalicoccus pleomorphus DSM 20574, Faecalicoccus pleomorphus LMG 17756, Streptococcus pleomorphus DSM 20574
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