STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE09609.1Magnesium chelatase subunit D. (643 aa)    
Predicted Functional Partners:
SFE73930.1
Protoporphyrin IX magnesium-chelatase.
 
0.992
SFE09726.1
Cobaltochelatase CobN.
 
 0.986
SFE08822.1
Cobaltochelatase CobN.
 
 0.977
SFE73897.1
Cobaltochelatase CobN subunit.
 
 0.977
SFE09639.1
Protoporphyrin IX magnesium-chelatase.
 
0.954
cbiA
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
    
 0.875
SFE73907.1
Magnesium chelatase subunit I.
 
0.807
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.801
SFE16919.1
Hypothetical protein.
  
 0.768
SFE42916.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
   
  0.699
Your Current Organism:
Succiniclasticum ruminis
NCBI taxonomy Id: 1123323
Other names: S. ruminis DSM 9236, Succiniclasticum ruminis DSM 9236
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