STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE25360.1Alpha/beta hydrolase family protein. (378 aa)    
Predicted Functional Partners:
SFE42947.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
   
 0.961
SFE70898.1
2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.
  
 
 0.891
SFE25228.1
4-carboxymuconolactone decarboxylase.
 
 
 0.877
SFE06736.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
  0.831
SFE25423.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 0.829
SFE46828.1
IMP dehydrogenase.
  
 
 0.817
SFE25666.1
Hypothetical protein.
 
 
 0.798
SFE03905.1
acyl-CoA dehydrogenase.
   
 0.788
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 0.773
SFE42916.1
Anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.
   
 0.765
Your Current Organism:
Succiniclasticum ruminis
NCBI taxonomy Id: 1123323
Other names: S. ruminis DSM 9236, Succiniclasticum ruminis DSM 9236
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