STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE25802.1Hypothetical protein. (186 aa)    
Predicted Functional Partners:
SFE25839.1
NADPH-dependent FMN reductase.
 
     0.747
SFE25770.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.621
SFE26274.1
Hypothetical protein.
 
    0.619
SFE25700.1
Cupin domain protein.
 
     0.569
SFE25872.1
Threonine/homoserine efflux transporter RhtA.
       0.557
SFE25666.1
Hypothetical protein.
 
    0.546
SFE25729.1
Alcohol dehydrogenase YqhD, Fe-dependent ADH family.
       0.474
SFE25228.1
4-carboxymuconolactone decarboxylase.
 
     0.450
Your Current Organism:
Succiniclasticum ruminis
NCBI taxonomy Id: 1123323
Other names: S. ruminis DSM 9236, Succiniclasticum ruminis DSM 9236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.