STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFE26018.14Fe-4S dicluster domain-containing protein. (256 aa)    
Predicted Functional Partners:
SFE06736.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.932
SFE14244.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
    
  0.852
SFE43106.1
Glutamate synthase (NADH) large subunit.
    
 0.843
SFE24453.1
Cysteine synthase A; Belongs to the cysteine synthase/cystathionine beta- synthase family.
   
 
  0.777
SFE77268.1
Dihydropyrimidine dehydrogenase (NAD+) subunit PreA.
  
 
 0.757
SFE48487.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
    
 0.728
SFE65998.1
Nitroreductase.
 
 
 0.705
SFE91198.1
NADPH-dependent glutamate synthase beta chain.
    
 0.701
SFE24431.1
O-acetylhomoserine sulfhydrylase.
    
  0.681
SFE76360.1
2-oxoglutarate ferredoxin oxidoreductase subunit delta.
    
 0.625
Your Current Organism:
Succiniclasticum ruminis
NCBI taxonomy Id: 1123323
Other names: S. ruminis DSM 9236, Succiniclasticum ruminis DSM 9236
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.